This model is from the article:
Competing G protein-coupled receptor kinases balance G protein and β-arrestin signaling
Heitzler D, Durand G, Gallay N, Rizk A, Ahn S, Kim J, Violin JD, Dupuy L, Gauthier C, Piketty V, Crépieux P, Poupon A, Clément F, Fages F, Lefkowitz RJ, Reiter E. Mol Syst Biol. 2012; 8: 590. 22735336 ,
Abstract:
Seven-transmembrane receptors (7TMRs) are involved in nearly all aspects of chemical communications and represent major drug targets. 7TMRs transmit their signals not only via heterotrimeric G proteins but also through β-arrestins, whose recruitment to the activated receptor is regulated by G protein-coupled receptor kinases (GRKs). In this paper, we combined experimental approaches with computational modeling to decipher the molecular mechanisms as well as the hidden dynamics governing extracellular signal-regulated kinase (ERK) activation by the angiotensin II type 1A receptor (AT(1A)R) in human embryonic kidney (HEK)293 cells. We built an abstracted ordinary differential equations (ODE)-based model that captured the available knowledge and experimental data. We inferred the unknown parameters by simultaneously fitting experimental data generated in both control and perturbed conditions. We demonstrate that, in addition to its well-established function in the desensitization of G-protein activation, GRK2 exerts a strong negative effect on β-arrestin-dependent signaling through its competition with GRK5 and 6 for receptor phosphorylation. Importantly, we experimentally confirmed the validity of this novel GRK2-dependent mechanism in both primary vascular smooth muscle cells naturally expressing the AT(1A)R, and HEK293 cells expressing other 7TMRs.

tiwarik@babraham.ac.uk Tiwari Krishna Babraham Institute 2019-11-04T13:45:47 2019-10-31T15:43:13Z Hbarr1RP1 compartmentOne k15 k15 Hbarr1RP1 compartmentOne 2019-10-31T15:43:13Z HRbarr2 compartmentOne k23 k23 HRbarr2 compartmentOne 2019-10-31T15:43:13Z GRK56 HR compartmentOne k18 k18 GRK56 HR compartmentOne 2019-10-31T15:43:13Z ERK HRbarr2 compartmentOne k21 k21 ERK HRbarr2 compartmentOne 2019-10-31T15:43:13Z HRP2 barr2 compartmentOne k20 k20 barr2 HRP2 compartmentOne 2019-10-31T15:43:13Z HRP2 compartmentOne k17 k17 HRP2 compartmentOne 2019-10-31T15:43:13Z HR barr2 compartmentOne k19 k19 barr2 HR compartmentOne 2019-10-31T15:43:13Z Hbarr2RP2 compartmentOne k24 k24 Hbarr2RP2 compartmentOne 2019-10-31T15:43:13Z Hbarr2RP1 compartmentOne k16 k16 Hbarr2RP1 compartmentOne 2019-10-31T15:43:13Z bpERK compartmentOne k25 k25 bpERK compartmentOne 2019-10-31T15:43:13Z ERK Hbarr2RP2 compartmentOne k22 k22 ERK Hbarr2RP2 compartmentOne 2019-10-31T15:43:13Z G HRP1 compartmentOne k1 k1 G HRP1 compartmentOne 2019-10-31T15:43:13Z DAG PKC compartmentOne k4 k4 DAG PKC compartmentOne 2019-10-31T15:43:13Z G compartmentOne k0 k0 G compartmentOne 2019-10-31T15:43:13Z G_a PIP2 compartmentOne k3 k3 G_a PIP2 compartmentOne 2019-10-31T15:43:13Z ERK PKC_a compartmentOne k5 k5 ERK PKC_a compartmentOne 2019-10-31T15:43:13Z G HR compartmentOne k2 k2 G HR compartmentOne 2019-10-31T15:43:13Z GpERK compartmentOne k9 k9 GpERK compartmentOne 2019-10-31T15:43:13Z GRK23 HR compartmentOne k10 k10 GRK23 HR compartmentOne 2019-10-31T15:43:13Z HRP1 barr1 compartmentOne k11 k11 barr1 HRP1 compartmentOne 2019-10-31T15:43:13Z Hbarr1RP1 compartmentOne k13 k13 Hbarr1RP1 compartmentOne 2019-10-31T15:43:13Z HRP1 barr2 compartmentOne k12 k12 barr2 HRP1 compartmentOne 2019-10-31T15:43:13Z G_a compartmentOne k6 k6 G_a compartmentOne 2019-10-31T15:43:13Z DAG compartmentOne k7 k7 DAG compartmentOne 2019-10-31T15:43:13Z PKC_a compartmentOne k8 k8 PKC_a compartmentOne 2019-10-31T15:43:13Z Hbarr2RP1 compartmentOne k14 k14 Hbarr2RP1 compartmentOne 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z
G protein
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G protein activated ERK
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beta arrestin activated ERK
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2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z 2019-10-31T15:43:13Z GpERK bpERK 2019-10-31T15:43:13Z compartmentOne Function_for_R_1 G compartmentOne k0 2019-10-31T15:43:13Z compartmentOne Function_for_R_2 G HRP1 compartmentOne k1 2019-10-31T15:43:13Z compartmentOne Function_for_R_3 G HR compartmentOne k2 2019-10-31T15:43:13Z compartmentOne Function_for_R_4 G_a PIP2 compartmentOne k3 2019-10-31T15:43:13Z compartmentOne Function_for_R_5 DAG PKC compartmentOne k4 2019-10-31T15:43:13Z compartmentOne Function_for_R_6 ERK PKC_a compartmentOne k5 2019-10-31T15:43:13Z compartmentOne Function_for_R_7 G_a compartmentOne k6 2019-10-31T15:43:13Z compartmentOne Function_for_R_8 DAG compartmentOne k7 2019-10-31T15:43:13Z compartmentOne Function_for_R_9 PKC_a compartmentOne k8 2019-10-31T15:43:13Z compartmentOne Function_for_R_10 GpERK compartmentOne k9 2019-10-31T15:43:13Z compartmentOne Function_for_R_11 GRK23 HR compartmentOne k10 2019-10-31T15:43:13Z compartmentOne Function_for_R_12 HRP1 barr1 compartmentOne k11 2019-10-31T15:43:13Z compartmentOne Function_for_R_13 Hbarr1RP1 compartmentOne k13 2019-10-31T15:43:13Z compartmentOne Function_for_R_14 HRP1 barr2 compartmentOne k12 2019-10-31T15:43:13Z compartmentOne Function_for_R_15 Hbarr2RP1 compartmentOne k14 2019-10-31T15:43:13Z compartmentOne Function_for_R_16 Hbarr1RP1 compartmentOne k15 2019-10-31T15:43:13Z compartmentOne Function_for_R_17 Hbarr2RP1 compartmentOne k16 2019-10-31T15:43:13Z compartmentOne Function_for_R_18 GRK56 HR compartmentOne k18 2019-10-31T15:43:13Z compartmentOne Function_for_R_19 HRP2 compartmentOne k17 2019-10-31T15:43:13Z compartmentOne Function_for_R_20 HR barr2 compartmentOne k19 2019-10-31T15:43:13Z compartmentOne Function_for_R_21 HRbarr2 compartmentOne k23 2019-10-31T15:43:13Z compartmentOne Function_for_R_22 HRP2 barr2 compartmentOne k20 2019-10-31T15:43:13Z compartmentOne Function_for_R_23 Hbarr2RP2 compartmentOne k24 2019-10-31T15:43:13Z compartmentOne Function_for_R_24 ERK HRbarr2 compartmentOne k21 2019-10-31T15:43:13Z compartmentOne Function_for_R_25 ERK Hbarr2RP2 compartmentOne k22 2019-10-31T15:43:13Z compartmentOne Function_for_R_26 bpERK compartmentOne k25