

UNLABELLED: Glycolysis is the main pathway for ATP production in the malaria parasite Plasmodium falciparum and essential for its survival. Following a sensitivity analysis of a detailed kinetic model for glycolysis in the parasite, the glucose transport reaction was identified as the step whose activity needed to be inhibited to the least extent to result in a 50% reduction in glycolytic flux. In a subsequent inhibitor titration with cytochalasin B, we confirmed the model analysis experimentally and measured a flux control coefficient of 0.3 for the glucose transporter. In addition to the glucose transporter, the glucokinase and phosphofructokinase had high flux control coefficients, while for the ATPase a small negative flux control coefficient was predicted. In a broader comparative analysis of glycolytic models, we identified a weakness in the P. falciparum pathway design with respect to stability towards perturbations in the ATP demand. DATABASE: The mathematical model described here has been submitted to the JWS Online Cellular Systems Modelling Database and can be accessed at http://jjj.bio.vu.nl/database/vanniekerk1. The SEEK-study including the experimental data set is available at DOI 10.15490/seek.1. INVESTIGATION: 56 (http://dx.doi.org/10.15490/seek.1. INVESTIGATION: 56).
SEEK ID: https://sandbox9.fairdomhub.org/publications/9
PubMed ID: 26648082
Projects: SEEK Hands-On Session
Publication type: Not specified
Journal: FEBS J
Citation: FEBS J. 2016 Feb;283(4):634-46. doi: 10.1111/febs.13615. Epub 2016 Jan 4.
Date Published: No date defined
Registered Mode: Not specified

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Created: 24th Apr 2018 at 11:22
Last updated: 9th Feb 2023 at 15:18

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