Targeting glycolysis in the malaria parasite Plasmodium falciparum.

Abstract:

UNLABELLED: Glycolysis is the main pathway for ATP production in the malaria parasite Plasmodium falciparum and essential for its survival. Following a sensitivity analysis of a detailed kinetic model for glycolysis in the parasite, the glucose transport reaction was identified as the step whose activity needed to be inhibited to the least extent to result in a 50% reduction in glycolytic flux. In a subsequent inhibitor titration with cytochalasin B, we confirmed the model analysis experimentally and measured a flux control coefficient of 0.3 for the glucose transporter. In addition to the glucose transporter, the glucokinase and phosphofructokinase had high flux control coefficients, while for the ATPase a small negative flux control coefficient was predicted. In a broader comparative analysis of glycolytic models, we identified a weakness in the P. falciparum pathway design with respect to stability towards perturbations in the ATP demand. DATABASE: The mathematical model described here has been submitted to the JWS Online Cellular Systems Modelling Database and can be accessed at http://jjj.bio.vu.nl/database/vanniekerk1. The SEEK-study including the experimental data set is available at DOI 10.15490/seek.1. INVESTIGATION: 56 (http://dx.doi.org/10.15490/seek.1. INVESTIGATION: 56).

SEEK ID: https://sandbox9.fairdomhub.org/publications/9

PubMed ID: 26648082

Projects: SEEK Hands-On Session

Publication type: Not specified

Journal: FEBS J

Citation: FEBS J. 2016 Feb;283(4):634-46. doi: 10.1111/febs.13615. Epub 2016 Jan 4.

Date Published: No date defined

Registered Mode: Not specified

Authors: D. D. van Niekerk, G. P. Penkler, F. du Toit, J. L. Snoep

help Submitter
Activity

Views: 430

Created: 24th Apr 2018 at 11:22

Last updated: 9th Feb 2023 at 15:18

help Tags

This item has not yet been tagged.

help Attributions

None

Powered by
(v.1.16.0-pre)
Copyright © 2008 - 2024 The University of Manchester and HITS gGmbH